JSmol is an HTML5-only version of Jmol. For a zip file containing all the files in this directory, see http://chemapps.stolaf.edu/jmol/zip/Jmol.zip. This page demonstrates HTML5-only Jmol. See test2.htm for a version that can use the signed Jmol applet, the unsigned Jmol applet, or JavaScript/HTML5 with or without WebGL. Credits: WebGL interface written by Takanori Nakane. Java2Script written by Zhou Renjian, et al. Jzlib written by Atsuhiko Yamanaka.
console image display faster sharper platformSpeed: 8 7 6 5 4 3 2 1 info show clear hide spacefill wire ball&stick cartoons fancy not flat color atomno color cpk color structure isosurface vdw off mep translucent opaque labels on off echo larger smaller | Try various buttons. If anything doesn't work please let me know. Enter "!" and a command into the search box and press ENTER or open the applet console to execute a script command.
keyword searches =caffeine? (RCSB) =1blu? (RCSB) =1crn? (RCSB) JSmol/Java JSmol/HTML5 | this-domain calls 2.2MB EDM test local file reading writing saving(PNGJ) make a nanotube minimize drag-minimize !quit flexible fit PyMOL session - dna estron.cml vasp.xml water.xodydata thread test echo/surface test pause resume !quit !exit moveto delay/hover animation spin/vibration mo homo SQUARED load data/1hxw.png (image) load data/square_planar.spartan load data/water.xyz.gz load data/no2_nbo.log.gz pmesh "data/sage.pmesh" load data/caffeine.mol isosurface "caffeine.jvxl" load data/1crn.pdb load data/k04041.cif {1 1 1} load data/cl2o.gamess (load +) mo homo mo lumo mesh fill image x 0.5 x 1.0 x 2.0 off on front mid back cyclflip2.spt !quit | direct database calls(unless MSIE) load $caffeine (from NCI) load =1blu (from RCSB) load =1d66 (from RCSB) load =4tra (from RCSB) load :1983 (PubChem CID) load :aspirin (PubChem name) load :smiles:CC/C=C/CC (PubChem SMILES) load $CC/C=C/CC (NCI SMILES) load :caffeine (PubChem, with mep) load $caffeine (NCI, with MMFF94 mep) load ==HEM (RCSB ligand)